Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm13351-201ENSMUST00000118087 414 ntBASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm8731-201ENSMUST00000118088 412 ntBASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm13019-201ENSMUST00000120000 276 ntBASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm11836-201ENSMUST00000121022 441 ntBASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm14993-201ENSMUST00000121180 164 ntBASIC12□□□□□ -0.49
Prpf38bQ80SY5 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12□□□□□ -0.49
Prpf38bQ80SY5 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm3726-201ENSMUST00000203110 785 ntBASIC12□□□□□ -0.49
Prpf38bQ80SY5 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm3433-201ENSMUST00000210149 1058 ntBASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 AC102368.1-201ENSMUST00000227161 892 ntBASIC12□□□□□ -0.49
Prpf38bQ80SY5 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm13135-201ENSMUST00000117628 3121 ntBASIC12□□□□□ -0.49
Prpf38bQ80SY5 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gm14034-201ENSMUST00000120147 551 ntBASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gm12030-201ENSMUST00000121917 223 ntBASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gm12906-201ENSMUST00000154610 441 ntBASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gm11942-201ENSMUST00000180255 345 ntBASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gm28686-201ENSMUST00000187404 609 ntBASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gm5870-201ENSMUST00000196461 282 ntBASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms