Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC14.46□□□□□ -0.1
Clcn1Q64347 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcn1Q64347 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Clcn1Q64347 CT025681.1-201ENSMUST00000225453 1855 ntBASIC14.46□□□□□ -0.1
Clcn1Q64347 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcn1Q64347 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.46□□□□□ -0.1
Clcn1Q64347 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.46□□□□□ -0.1
Clcn1Q64347 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcn1Q64347 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcn1Q64347 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcn1Q64347 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clcn1Q64347 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.45□□□□□ -0.1
Clcn1Q64347 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Mir671-201ENSMUST00000102432 98 ntBASIC14.45□□□□□ -0.1
Clcn1Q64347 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clcn1Q64347 Gm11500-201ENSMUST00000118237 601 ntBASIC14.45□□□□□ -0.1
Clcn1Q64347 Gm14126-201ENSMUST00000122345 395 ntBASIC14.45□□□□□ -0.1
Clcn1Q64347 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC14.45□□□□□ -0.1
Clcn1Q64347 Gm4895-201ENSMUST00000181646 1137 ntBASIC14.45□□□□□ -0.1
Clcn1Q64347 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC14.45□□□□□ -0.1
Clcn1Q64347 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.45□□□□□ -0.1
Clcn1Q64347 Gm38170-201ENSMUST00000195404 816 ntBASIC14.45□□□□□ -0.1
Clcn1Q64347 Gm42433-201ENSMUST00000196806 940 ntBASIC14.45□□□□□ -0.1
Clcn1Q64347 Gm44323-201ENSMUST00000198689 129 ntBASIC14.45□□□□□ -0.1
Clcn1Q64347 Gm42779-201ENSMUST00000198807 406 ntBASIC14.45□□□□□ -0.1
Clcn1Q64347 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clcn1Q64347 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clcn1Q64347 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC14.45□□□□□ -0.1
Clcn1Q64347 Gm7525-201ENSMUST00000219425 454 ntBASIC14.45□□□□□ -0.1
Clcn1Q64347 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.45□□□□□ -0.1
Clcn1Q64347 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn1Q64347 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clcn1Q64347 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Clcn1Q64347 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 AC122811.1-201ENSMUST00000222257 2921 ntBASIC14.44□□□□□ -0.1
Clcn1Q64347 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.44□□□□□ -0.1
Clcn1Q64347 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Gm25053-201ENSMUST00000103982 133 ntBASIC14.44□□□□□ -0.1
Clcn1Q64347 Gm25922-201ENSMUST00000104281 130 ntBASIC14.44□□□□□ -0.1
Clcn1Q64347 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clcn1Q64347 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Clcn1Q64347 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Clcn1Q64347 Gm12274-201ENSMUST00000120062 385 ntBASIC14.44□□□□□ -0.1
Clcn1Q64347 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Gm24679-201ENSMUST00000158762 111 ntBASIC14.44□□□□□ -0.1
Clcn1Q64347 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC14.44□□□□□ -0.1
Clcn1Q64347 Gm25026-201ENSMUST00000175017 188 ntBASIC14.44□□□□□ -0.1
Clcn1Q64347 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC14.44□□□□□ -0.1
Clcn1Q64347 Gm25053-202ENSMUST00000199731 132 ntBASIC14.44□□□□□ -0.1
Clcn1Q64347 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn1Q64347 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC14.43□□□□□ -0.1
Clcn1Q64347 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms