Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Mir1901-201ENSMUST00000122616 78 ntBASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Gm19009-201ENSMUST00000223072 823 ntBASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Gm14892-201ENSMUST00000117636 267 ntBASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Gm15197-201ENSMUST00000120526 478 ntBASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Gm42816-201ENSMUST00000198433 325 ntBASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps54Q5SPW0 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm13117-201ENSMUST00000120894 691 ntBASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm13284-201ENSMUST00000121020 547 ntBASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm5100-201ENSMUST00000195631 589 ntBASIC13.53□□□□□ -0.24
Vps54Q5SPW0 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 114.9 ms