Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm37486-201ENSMUST00000195663 405 ntBASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm9790-201ENSMUST00000054148 288 ntBASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm8661-201ENSMUST00000118688 992 ntBASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm2492-201ENSMUST00000221355 1394 ntBASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Gm35412-201ENSMUST00000220437 999 ntBASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Gm22900-201ENSMUST00000104538 130 ntBASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 AC165092.1-201ENSMUST00000224018 486 ntBASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 H2-Pb-201ENSMUST00000172731 531 ntBASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Pea15b-202ENSMUST00000183185 555 ntBASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Gm5311-201ENSMUST00000203518 709 ntBASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vps13aQ5H8C4 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Gm23899-201ENSMUST00000158112 90 ntBASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Gm20281-201ENSMUST00000188225 267 ntBASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Gm38301-201ENSMUST00000195573 543 ntBASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms