Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CiitaP79621 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.27□□□□□ -0.45
CiitaP79621 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CiitaP79621 Erich3-203ENSMUST00000189969 3460 ntBASIC12.27□□□□□ -0.45
CiitaP79621 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CiitaP79621 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
CiitaP79621 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CiitaP79621 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Gm14270-201ENSMUST00000118388 846 ntBASIC12.26□□□□□ -0.45
CiitaP79621 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.26□□□□□ -0.45
CiitaP79621 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.26□□□□□ -0.45
CiitaP79621 Gm3793-201ENSMUST00000204973 672 ntBASIC12.26□□□□□ -0.45
CiitaP79621 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.26□□□□□ -0.45
CiitaP79621 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CiitaP79621 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.26□□□□□ -0.45
CiitaP79621 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
CiitaP79621 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CiitaP79621 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CiitaP79621 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.26□□□□□ -0.45
CiitaP79621 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.25□□□□□ -0.45
CiitaP79621 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CiitaP79621 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CiitaP79621 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.25□□□□□ -0.45
CiitaP79621 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.25□□□□□ -0.45
CiitaP79621 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.25□□□□□ -0.45
CiitaP79621 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.25□□□□□ -0.45
CiitaP79621 Gm25343-201ENSMUST00000157460 107 ntBASIC12.25□□□□□ -0.45
CiitaP79621 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CiitaP79621 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.25□□□□□ -0.45
CiitaP79621 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CiitaP79621 Gm19091-201ENSMUST00000208120 978 ntBASIC12.25□□□□□ -0.45
CiitaP79621 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.25□□□□□ -0.45
CiitaP79621 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.25□□□□□ -0.45
CiitaP79621 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.25□□□□□ -0.45
CiitaP79621 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CiitaP79621 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.25□□□□□ -0.45
CiitaP79621 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.25□□□□□ -0.45
CiitaP79621 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.25□□□□□ -0.45
CiitaP79621 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.25□□□□□ -0.45
CiitaP79621 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.25□□□□□ -0.45
CiitaP79621 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.25□□□□□ -0.45
CiitaP79621 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.25□□□□□ -0.45
CiitaP79621 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.25□□□□□ -0.45
CiitaP79621 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.25□□□□□ -0.45
CiitaP79621 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CiitaP79621 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.25□□□□□ -0.45
CiitaP79621 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CiitaP79621 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.24□□□□□ -0.45
CiitaP79621 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CiitaP79621 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms