Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lsm3P62311 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lsm3P62311 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lsm3P62311 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Lsm3P62311 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Lsm3P62311 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lsm3P62311 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lsm3P62311 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lsm3P62311 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Lsm3P62311 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lsm3P62311 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lsm3P62311 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Lsm3P62311 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Lsm3P62311 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Lsm3P62311 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Lsm3P62311 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Lsm3P62311 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Lsm3P62311 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lsm3P62311 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lsm3P62311 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Lsm3P62311 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.21□□□□□ -0.77
Lsm3P62311 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lsm3P62311 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lsm3P62311 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.21□□□□□ -0.77
Lsm3P62311 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
Lsm3P62311 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lsm3P62311 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Lsm3P62311 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lsm3P62311 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lsm3P62311 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC10.21□□□□□ -0.77
Lsm3P62311 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lsm3P62311 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lsm3P62311 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lsm3P62311 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC10.21□□□□□ -0.77
Lsm3P62311 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Lsm3P62311 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lsm3P62311 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Lsm3P62311 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Lsm3P62311 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Lsm3P62311 Gm11573-201ENSMUST00000119956 394 ntBASIC10.21□□□□□ -0.77
Lsm3P62311 Gm14057-201ENSMUST00000120631 482 ntBASIC10.21□□□□□ -0.77
Lsm3P62311 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lsm3P62311 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.21□□□□□ -0.77
Lsm3P62311 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.21□□□□□ -0.77
Lsm3P62311 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.21□□□□□ -0.77
Lsm3P62311 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.21□□□□□ -0.77
Lsm3P62311 Gm6244-201ENSMUST00000178732 841 ntBASIC10.21□□□□□ -0.77
Lsm3P62311 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.21□□□□□ -0.77
Lsm3P62311 Gm3890-201ENSMUST00000182416 207 ntBASIC10.21□□□□□ -0.77
Lsm3P62311 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.21□□□□□ -0.77
Lsm3P62311 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.21□□□□□ -0.77
Lsm3P62311 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.21□□□□□ -0.77
Lsm3P62311 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.21□□□□□ -0.77
Lsm3P62311 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.21□□□□□ -0.77
Lsm3P62311 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.21□□□□□ -0.77
Lsm3P62311 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.21□□□□□ -0.77
Lsm3P62311 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lsm3P62311 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.21□□□□□ -0.78
Lsm3P62311 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.21□□□□□ -0.78
Lsm3P62311 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.21□□□□□ -0.78
Lsm3P62311 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Lsm3P62311 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm3P62311 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.21□□□□□ -0.78
Lsm3P62311 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Lsm3P62311 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.2□□□□□ -0.78
Lsm3P62311 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.2□□□□□ -0.78
Lsm3P62311 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Lsm3P62311 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms