Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Mir877-201ENSMUST00000104738 85 ntBASIC10.07□□□□□ -0.8
Sf3b6P59708 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm14109-201ENSMUST00000118814 309 ntBASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm6082-201ENSMUST00000215204 454 ntBASIC10.07□□□□□ -0.8
Sf3b6P59708 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm9257-201ENSMUST00000221254 232 ntBASIC10.07□□□□□ -0.8
Sf3b6P59708 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.07□□□□□ -0.8
Sf3b6P59708 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.07□□□□□ -0.8
Sf3b6P59708 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.07□□□□□ -0.8
Sf3b6P59708 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.07□□□□□ -0.8
Sf3b6P59708 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.07□□□□□ -0.8
Sf3b6P59708 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Gm6963-201ENSMUST00000147879 379 ntBASIC10.06□□□□□ -0.8
Sf3b6P59708 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.06□□□□□ -0.8
Sf3b6P59708 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Gm4310-201ENSMUST00000177847 889 ntBASIC10.06□□□□□ -0.8
Sf3b6P59708 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.06□□□□□ -0.8
Sf3b6P59708 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.06□□□□□ -0.8
Sf3b6P59708 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC10.06□□□□□ -0.8
Sf3b6P59708 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.06□□□□□ -0.8
Sf3b6P59708 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Nln-205ENSMUST00000224945 2486 ntBASIC10.06□□□□□ -0.8
Sf3b6P59708 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sf3b6P59708 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sf3b6P59708 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms