Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.6□□□□□ -0.39
Tpm1P58771 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.6□□□□□ -0.39
Tpm1P58771 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.6□□□□□ -0.39
Tpm1P58771 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC12.59□□□□□ -0.39
Tpm1P58771 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.59□□□□□ -0.39
Tpm1P58771 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.59□□□□□ -0.39
Tpm1P58771 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Gm23270-201ENSMUST00000104055 131 ntBASIC12.59□□□□□ -0.39
Tpm1P58771 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Tpm1P58771 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.59□□□□□ -0.39
Tpm1P58771 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.59□□□□□ -0.39
Tpm1P58771 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.59□□□□□ -0.39
Tpm1P58771 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.59□□□□□ -0.39
Tpm1P58771 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.59□□□□□ -0.39
Tpm1P58771 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Tpm1P58771 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.59□□□□□ -0.39
Tpm1P58771 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Tpm1P58771 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.59□□□□□ -0.39
Tpm1P58771 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Gm32999-201ENSMUST00000192693 562 ntBASIC12.59□□□□□ -0.39
Tpm1P58771 Gm5982-201ENSMUST00000196234 512 ntBASIC12.59□□□□□ -0.39
Tpm1P58771 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Tpm1P58771 Olfr284-202ENSMUST00000206647 966 ntBASIC12.59□□□□□ -0.39
Tpm1P58771 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.59□□□□□ -0.39
Tpm1P58771 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Tpm1P58771 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.59□□□□□ -0.39
Tpm1P58771 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC12.59□□□□□ -0.39
Tpm1P58771 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm1P58771 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.58□□□□□ -0.39
Tpm1P58771 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Tpm1P58771 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tpm1P58771 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tpm1P58771 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.58□□□□□ -0.4
Tpm1P58771 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tpm1P58771 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Gm14109-201ENSMUST00000118814 309 ntBASIC12.58□□□□□ -0.4
Tpm1P58771 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.58□□□□□ -0.4
Tpm1P58771 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.58□□□□□ -0.4
Tpm1P58771 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.58□□□□□ -0.4
Tpm1P58771 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.58□□□□□ -0.4
Tpm1P58771 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.58□□□□□ -0.4
Tpm1P58771 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Tpm1P58771 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.58□□□□□ -0.4
Tpm1P58771 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.58□□□□□ -0.4
Tpm1P58771 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Tpm1P58771 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC12.58□□□□□ -0.4
Tpm1P58771 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms