Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
SftpbP50405 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.55□□□□□ -0.56
SftpbP50405 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SftpbP50405 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.55□□□□□ -0.56
SftpbP50405 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.55□□□□□ -0.56
SftpbP50405 Gm8566-201ENSMUST00000120174 465 ntBASIC11.55□□□□□ -0.56
SftpbP50405 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.55□□□□□ -0.56
SftpbP50405 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.55□□□□□ -0.56
SftpbP50405 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.55□□□□□ -0.56
SftpbP50405 Gm6867-201ENSMUST00000219165 425 ntBASIC11.55□□□□□ -0.56
SftpbP50405 Gm6722-201ENSMUST00000221586 390 ntBASIC11.55□□□□□ -0.56
SftpbP50405 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.55□□□□□ -0.56
SftpbP50405 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SftpbP50405 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SftpbP50405 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SftpbP50405 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SftpbP50405 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
SftpbP50405 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.55□□□□□ -0.56
SftpbP50405 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
SftpbP50405 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
SftpbP50405 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.54□□□□□ -0.56
SftpbP50405 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.54□□□□□ -0.56
SftpbP50405 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.54□□□□□ -0.56
SftpbP50405 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SftpbP50405 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SftpbP50405 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
SftpbP50405 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SftpbP50405 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.54□□□□□ -0.56
SftpbP50405 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.54□□□□□ -0.56
SftpbP50405 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
SftpbP50405 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.54□□□□□ -0.56
SftpbP50405 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.54□□□□□ -0.56
SftpbP50405 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.54□□□□□ -0.56
SftpbP50405 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.54□□□□□ -0.56
SftpbP50405 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.54□□□□□ -0.56
SftpbP50405 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.54□□□□□ -0.56
SftpbP50405 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
SftpbP50405 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SftpbP50405 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SftpbP50405 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SftpbP50405 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SftpbP50405 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SftpbP50405 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.54□□□□□ -0.56
SftpbP50405 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.54□□□□□ -0.56
SftpbP50405 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
SftpbP50405 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SftpbP50405 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.53□□□□□ -0.56
SftpbP50405 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.53□□□□□ -0.56
SftpbP50405 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms