Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Vps4bP46467 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Vps4bP46467 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Vps4bP46467 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Vps4bP46467 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Vps4bP46467 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Vps4bP46467 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vps4bP46467 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Vps4bP46467 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vps4bP46467 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Vps4bP46467 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vps4bP46467 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.49□□□□□ -0.57
Vps4bP46467 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vps4bP46467 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.49□□□□□ -0.57
Vps4bP46467 Gm27438-201ENSMUST00000183480 110 ntBASIC11.49□□□□□ -0.57
Vps4bP46467 Gm7467-201ENSMUST00000185173 652 ntBASIC11.49□□□□□ -0.57
Vps4bP46467 Gm7593-201ENSMUST00000187246 644 ntBASIC11.49□□□□□ -0.57
Vps4bP46467 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.49□□□□□ -0.57
Vps4bP46467 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.49□□□□□ -0.57
Vps4bP46467 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Vps4bP46467 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.49□□□□□ -0.57
Vps4bP46467 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Vps4bP46467 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vps4bP46467 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vps4bP46467 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps4bP46467 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.49□□□□□ -0.57
Vps4bP46467 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.49□□□□□ -0.57
Vps4bP46467 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Gm24891-201ENSMUST00000104391 136 ntBASIC11.48□□□□□ -0.57
Vps4bP46467 Gm12501-201ENSMUST00000119163 529 ntBASIC11.48□□□□□ -0.57
Vps4bP46467 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.48□□□□□ -0.57
Vps4bP46467 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.48□□□□□ -0.57
Vps4bP46467 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.48□□□□□ -0.57
Vps4bP46467 Gm8459-201ENSMUST00000162504 760 ntBASIC11.48□□□□□ -0.57
Vps4bP46467 Gm29499-201ENSMUST00000189151 486 ntBASIC11.48□□□□□ -0.57
Vps4bP46467 Gm28329-201ENSMUST00000191208 689 ntBASIC11.48□□□□□ -0.57
Vps4bP46467 Gm29171-201ENSMUST00000191397 486 ntBASIC11.48□□□□□ -0.57
Vps4bP46467 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.48□□□□□ -0.57
Vps4bP46467 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Gm45856-201ENSMUST00000212752 416 ntBASIC11.48□□□□□ -0.57
Vps4bP46467 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.48□□□□□ -0.57
Vps4bP46467 Gm6722-201ENSMUST00000221586 390 ntBASIC11.48□□□□□ -0.57
Vps4bP46467 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.48□□□□□ -0.57
Vps4bP46467 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Vps4bP46467 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Gm21811-201ENSMUST00000096485 930 ntBASIC11.48□□□□□ -0.57
Vps4bP46467 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.48□□□□□ -0.57
Vps4bP46467 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Vps4bP46467 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms