Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm18734-201ENSMUST00000172937 808 ntBASIC12.34□□□□□ -0.43
Sox5P35710 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox5P35710 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox5P35710 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox5P35710 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox5P35710 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox5P35710 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sox5P35710 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox5P35710 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Sox5P35710 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox5P35710 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.34□□□□□ -0.43
Sox5P35710 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.34□□□□□ -0.43
Sox5P35710 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox5P35710 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox5P35710 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox5P35710 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox5P35710 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox5P35710 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.34□□□□□ -0.43
Sox5P35710 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox5P35710 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox5P35710 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Sox5P35710 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox5P35710 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sox5P35710 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sox5P35710 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox5P35710 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sox5P35710 Gm25148-201ENSMUST00000104611 123 ntBASIC12.33□□□□□ -0.44
Sox5P35710 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox5P35710 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sox5P35710 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Sox5P35710 Gm12579-201ENSMUST00000118040 783 ntBASIC12.33□□□□□ -0.44
Sox5P35710 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.33□□□□□ -0.44
Sox5P35710 Gm12196-201ENSMUST00000120954 262 ntBASIC12.33□□□□□ -0.44
Sox5P35710 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Gm22846-201ENSMUST00000157706 270 ntBASIC12.33□□□□□ -0.44
Sox5P35710 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sox5P35710 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox5P35710 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.33□□□□□ -0.44
Sox5P35710 Gm42867-201ENSMUST00000202995 469 ntBASIC12.33□□□□□ -0.44
Sox5P35710 Gm7783-201ENSMUST00000204795 781 ntBASIC12.33□□□□□ -0.44
Sox5P35710 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.33□□□□□ -0.44
Sox5P35710 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.33□□□□□ -0.44
Sox5P35710 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Sox5P35710 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Sox5P35710 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.33□□□□□ -0.44
Sox5P35710 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.33□□□□□ -0.44
Sox5P35710 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox5P35710 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox5P35710 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Snord17-201ENSMUST00000104526 238 ntBASIC12.32□□□□□ -0.44
Sox5P35710 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.32□□□□□ -0.44
Sox5P35710 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Gm15374-201ENSMUST00000119313 844 ntBASIC12.32□□□□□ -0.44
Sox5P35710 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.32□□□□□ -0.44
Sox5P35710 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Sox5P35710 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.32□□□□□ -0.44
Sox5P35710 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.32□□□□□ -0.44
Sox5P35710 Gm2965-201ENSMUST00000198365 343 ntBASIC12.32□□□□□ -0.44
Sox5P35710 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.32□□□□□ -0.44
Sox5P35710 Gm6108-201ENSMUST00000208365 367 ntBASIC12.32□□□□□ -0.44
Sox5P35710 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.32□□□□□ -0.44
Sox5P35710 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.32□□□□□ -0.44
Sox5P35710 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox5P35710 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sox5P35710 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox5P35710 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.32□□□□□ -0.44
Sox5P35710 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms