Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.41□□□□□ -0.58
VimP20152 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
VimP20152 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Gm42627-201ENSMUST00000197347 224 ntBASIC11.41□□□□□ -0.58
VimP20152 Gm18018-201ENSMUST00000198273 408 ntBASIC11.41□□□□□ -0.58
VimP20152 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.41□□□□□ -0.58
VimP20152 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
VimP20152 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.41□□□□□ -0.58
VimP20152 Gm17794-201ENSMUST00000220252 955 ntBASIC11.41□□□□□ -0.58
VimP20152 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.41□□□□□ -0.58
VimP20152 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.41□□□□□ -0.58
VimP20152 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
VimP20152 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.41□□□□□ -0.58
VimP20152 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
VimP20152 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.41□□□□□ -0.58
VimP20152 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
VimP20152 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
VimP20152 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Gm44888-201ENSMUST00000209119 2541 ntBASIC11.4□□□□□ -0.58
VimP20152 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
VimP20152 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.4□□□□□ -0.58
VimP20152 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Gm7488-201ENSMUST00000117148 684 ntBASIC11.4□□□□□ -0.58
VimP20152 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.4□□□□□ -0.58
VimP20152 Gm15920-201ENSMUST00000118998 402 ntBASIC11.4□□□□□ -0.58
VimP20152 Gm14832-201ENSMUST00000121289 322 ntBASIC11.4□□□□□ -0.58
VimP20152 Gm12091-201ENSMUST00000146791 830 ntBASIC11.4□□□□□ -0.58
VimP20152 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.4□□□□□ -0.58
VimP20152 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.4□□□□□ -0.58
VimP20152 Gm6222-202ENSMUST00000182143 629 ntBASIC11.4□□□□□ -0.58
VimP20152 Gm27682-201ENSMUST00000183930 110 ntBASIC11.4□□□□□ -0.58
VimP20152 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.4□□□□□ -0.58
VimP20152 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.4□□□□□ -0.58
VimP20152 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.4□□□□□ -0.58
VimP20152 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.4□□□□□ -0.58
VimP20152 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.4□□□□□ -0.58
VimP20152 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VimP20152 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
VimP20152 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
VimP20152 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
VimP20152 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
VimP20152 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
VimP20152 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
VimP20152 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
VimP20152 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
VimP20152 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.39□□□□□ -0.59
VimP20152 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.39□□□□□ -0.59
VimP20152 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
VimP20152 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.39□□□□□ -0.59
VimP20152 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.39□□□□□ -0.59
VimP20152 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Gm1335-201ENSMUST00000121653 386 ntBASIC11.39□□□□□ -0.59
VimP20152 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms