Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.16□□□□□ -0.62
Hoxa4P06798 Mt1-202ENSMUST00000211807 1085 ntBASIC11.16□□□□□ -0.62
Hoxa4P06798 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Hoxa4P06798 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.16□□□□□ -0.62
Hoxa4P06798 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.16□□□□□ -0.62
Hoxa4P06798 Gm10020-201ENSMUST00000081993 612 ntBASIC11.16□□□□□ -0.62
Hoxa4P06798 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Hoxa4P06798 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa4P06798 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.16□□□□□ -0.62
Hoxa4P06798 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa4P06798 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Hoxa4P06798 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Hoxa4P06798 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa4P06798 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa4P06798 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa4P06798 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hoxa4P06798 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa4P06798 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa4P06798 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa4P06798 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa4P06798 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa4P06798 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa4P06798 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa4P06798 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa4P06798 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.16□□□□□ -0.62
Hoxa4P06798 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.16□□□□□ -0.62
Hoxa4P06798 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Hoxa4P06798 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Hoxa4P06798 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Hoxa4P06798 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Hoxa4P06798 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.15□□□□□ -0.62
Hoxa4P06798 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Hoxa4P06798 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.15□□□□□ -0.62
Hoxa4P06798 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.15□□□□□ -0.62
Hoxa4P06798 Gm12274-201ENSMUST00000120062 385 ntBASIC11.15□□□□□ -0.62
Hoxa4P06798 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.15□□□□□ -0.62
Hoxa4P06798 Gm24398-201ENSMUST00000157870 109 ntBASIC11.15□□□□□ -0.62
Hoxa4P06798 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Gm6407-201ENSMUST00000176468 549 ntBASIC11.15□□□□□ -0.62
Hoxa4P06798 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.15□□□□□ -0.62
Hoxa4P06798 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.15□□□□□ -0.62
Hoxa4P06798 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.15□□□□□ -0.62
Hoxa4P06798 Gm30671-201ENSMUST00000214898 318 ntBASIC11.15□□□□□ -0.62
Hoxa4P06798 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.15□□□□□ -0.62
Hoxa4P06798 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Hoxa4P06798 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.15□□□□□ -0.62
Hoxa4P06798 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Hoxa4P06798 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Hoxa4P06798 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Hoxa4P06798 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa4P06798 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hoxa4P06798 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Hoxa4P06798 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hoxa4P06798 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Hoxa4P06798 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hoxa4P06798 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Hoxa4P06798 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.14□□□□□ -0.63
Hoxa4P06798 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.14□□□□□ -0.63
Hoxa4P06798 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.14□□□□□ -0.63
Hoxa4P06798 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.14□□□□□ -0.63
Hoxa4P06798 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Hoxa4P06798 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Hoxa4P06798 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
Hoxa4P06798 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.14□□□□□ -0.63
Hoxa4P06798 Mir1901-201ENSMUST00000122616 78 ntBASIC11.14□□□□□ -0.63
Hoxa4P06798 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Gm28388-201ENSMUST00000186262 437 ntBASIC11.14□□□□□ -0.63
Hoxa4P06798 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.14□□□□□ -0.63
Hoxa4P06798 Gm5302-201ENSMUST00000202130 796 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms