Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Gm20495-201ENSMUST00000173902 235 ntBASIC9.75□□□□□ -0.85
H3f3cP02301 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.75□□□□□ -0.85
H3f3cP02301 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.75□□□□□ -0.85
H3f3cP02301 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
H3f3cP02301 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.75□□□□□ -0.85
H3f3cP02301 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.75□□□□□ -0.85
H3f3cP02301 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
H3f3cP02301 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.75□□□□□ -0.85
H3f3cP02301 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.75□□□□□ -0.85
H3f3cP02301 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
H3f3cP02301 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
H3f3cP02301 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.75□□□□□ -0.85
H3f3cP02301 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.75□□□□□ -0.85
H3f3cP02301 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.75□□□□□ -0.85
H3f3cP02301 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
H3f3cP02301 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.74□□□□□ -0.85
H3f3cP02301 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.74□□□□□ -0.85
H3f3cP02301 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
H3f3cP02301 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
H3f3cP02301 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.74□□□□□ -0.85
H3f3cP02301 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.74□□□□□ -0.85
H3f3cP02301 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Gm11331-201ENSMUST00000119764 288 ntBASIC9.74□□□□□ -0.85
H3f3cP02301 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
H3f3cP02301 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.74□□□□□ -0.85
H3f3cP02301 Gm3329-201ENSMUST00000159873 556 ntBASIC9.74□□□□□ -0.85
H3f3cP02301 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.74□□□□□ -0.85
H3f3cP02301 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.74□□□□□ -0.85
H3f3cP02301 Mir6979-201ENSMUST00000183927 56 ntBASIC9.74□□□□□ -0.85
H3f3cP02301 Gm43138-201ENSMUST00000199123 708 ntBASIC9.74□□□□□ -0.85
H3f3cP02301 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.74□□□□□ -0.85
H3f3cP02301 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.74□□□□□ -0.85
H3f3cP02301 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
H3f3cP02301 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
H3f3cP02301 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
H3f3cP02301 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
H3f3cP02301 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
H3f3cP02301 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
H3f3cP02301 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
H3f3cP02301 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
H3f3cP02301 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.73□□□□□ -0.85
H3f3cP02301 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
H3f3cP02301 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.73□□□□□ -0.85
H3f3cP02301 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
H3f3cP02301 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
H3f3cP02301 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
H3f3cP02301 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
H3f3cP02301 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
H3f3cP02301 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
H3f3cP02301 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms