Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ubr1O70481 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ubr1O70481 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr1O70481 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ubr1O70481 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.42□□□□□ -0.1
Ubr1O70481 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ubr1O70481 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr1O70481 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.42□□□□□ -0.1
Ubr1O70481 Gm8876-201ENSMUST00000120768 1122 ntBASIC14.42□□□□□ -0.1
Ubr1O70481 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC14.42□□□□□ -0.1
Ubr1O70481 Gm26313-201ENSMUST00000157770 308 ntBASIC14.42□□□□□ -0.1
Ubr1O70481 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr1O70481 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ubr1O70481 Gm43097-201ENSMUST00000196867 151 ntBASIC14.42□□□□□ -0.1
Ubr1O70481 Gm42617-201ENSMUST00000197640 1229 ntBASIC14.42□□□□□ -0.1
Ubr1O70481 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr1O70481 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr1O70481 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC14.42□□□□□ -0.1
Ubr1O70481 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Ubr1O70481 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ubr1O70481 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ubr1O70481 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Gm42833-201ENSMUST00000196019 2124 ntBASIC14.41□□□□□ -0.1
Ubr1O70481 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC14.41□□□□□ -0.1
Ubr1O70481 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ubr1O70481 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC14.41□□□□□ -0.1
Ubr1O70481 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC14.41□□□□□ -0.1
Ubr1O70481 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC14.41□□□□□ -0.1
Ubr1O70481 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Gm2345-201ENSMUST00000193451 589 ntBASIC14.41□□□□□ -0.1
Ubr1O70481 Gm3527-201ENSMUST00000198905 460 ntBASIC14.41□□□□□ -0.1
Ubr1O70481 Gm9644-201ENSMUST00000212828 1183 ntBASIC14.41□□□□□ -0.1
Ubr1O70481 AC105408.1-201ENSMUST00000227771 802 ntBASIC14.41□□□□□ -0.1
Ubr1O70481 AC154213.1-201ENSMUST00000228234 583 ntBASIC14.41□□□□□ -0.1
Ubr1O70481 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ubr1O70481 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ubr1O70481 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.41□□□□□ -0.1
Ubr1O70481 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC14.41□□□□□ -0.1
Ubr1O70481 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubr1O70481 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ubr1O70481 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC14.4□□□□□ -0.1
Ubr1O70481 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Mir291b-201ENSMUST00000104838 79 ntBASIC14.4□□□□□ -0.1
Ubr1O70481 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC14.4□□□□□ -0.1
Ubr1O70481 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC14.4□□□□□ -0.1
Ubr1O70481 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC14.4□□□□□ -0.1
Ubr1O70481 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Gm7572-201ENSMUST00000182616 766 ntBASIC14.4□□□□□ -0.1
Ubr1O70481 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC14.4□□□□□ -0.1
Ubr1O70481 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ubr1O70481 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ubr1O70481 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr1O70481 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Ubr1O70481 Gm24933-201ENSMUST00000103762 110 ntBASIC14.39□□□□□ -0.11
Ubr1O70481 Gm23252-201ENSMUST00000103776 110 ntBASIC14.39□□□□□ -0.11
Ubr1O70481 Gm23595-201ENSMUST00000104306 130 ntBASIC14.39□□□□□ -0.11
Ubr1O70481 Gm22495-201ENSMUST00000104492 126 ntBASIC14.39□□□□□ -0.11
Ubr1O70481 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubr1O70481 Gm5510-201ENSMUST00000117826 486 ntBASIC14.39□□□□□ -0.11
Ubr1O70481 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC14.39□□□□□ -0.11
Ubr1O70481 Gm24294-201ENSMUST00000158295 277 ntBASIC14.39□□□□□ -0.11
Ubr1O70481 Gm26443-201ENSMUST00000179610 110 ntBASIC14.39□□□□□ -0.11
Ubr1O70481 Gm6291-201ENSMUST00000179994 309 ntBASIC14.39□□□□□ -0.11
Ubr1O70481 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms