Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm8741-201ENSMUST00000174736 384 ntBASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Gm7783-201ENSMUST00000204795 781 ntBASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Gm44651-201ENSMUST00000207343 372 ntBASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Olfr582-201ENSMUST00000098212 960 ntBASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pcdh1F7BJK1 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Gm11783-201ENSMUST00000119549 885 ntBASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Gm10807-201ENSMUST00000177134 795 ntBASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Gm45113-201ENSMUST00000207518 165 ntBASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Gm13097-201ENSMUST00000210722 397 ntBASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdh1F7BJK1 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms