Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Snord55-201ENSMUST00000174939 79 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm4034-201ENSMUST00000187674 480 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm44882-201ENSMUST00000205702 802 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 AC160112.1-201ENSMUST00000219139 714 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Retnlg-201ENSMUST00000065666 608 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Clec10a-202ENSMUST00000102571 1496 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm38089-201ENSMUST00000193585 1514 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Ccdc159-201ENSMUST00000006403 1531 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm7841-201ENSMUST00000122108 1629 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm21818-201ENSMUST00000178828 513 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm10318-201ENSMUST00000186874 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 CT025618.1-203ENSMUST00000227008 589 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 AC154806.7-201ENSMUST00000227998 202 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Inca1-204ENSMUST00000108543 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm13655-201ENSMUST00000119695 745 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm22604-201ENSMUST00000157604 311 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Rbm4-201ENSMUST00000164209 801 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Tcstv3-202ENSMUST00000223967 779 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Mettl18-201ENSMUST00000045694 1513 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Olfr550-201ENSMUST00000098225 1038 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 A1cf-204ENSMUST00000224564 1432 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm25763-201ENSMUST00000104099 129 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm12452-201ENSMUST00000117128 331 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Tac1-203ENSMUST00000184986 691 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm9244-201ENSMUST00000056767 2129 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Katna1-202ENSMUST00000165806 1775 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Katna1-201ENSMUST00000019929 1774 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm3052-202ENSMUST00000188254 2224 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm11799-201ENSMUST00000116110 460 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm14370-201ENSMUST00000122460 868 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm15273-201ENSMUST00000142302 868 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm7023-201ENSMUST00000147295 868 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm14357-201ENSMUST00000178352 868 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm14361-201ENSMUST00000178547 868 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms