Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Gm24279-201ENSMUST00000104236 131 ntBASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Gm28671-201ENSMUST00000187036 692 ntBASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Gm2345-201ENSMUST00000193451 589 ntBASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Gm6478-201ENSMUST00000099450 742 ntBASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1fQ9JIS7 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Mir291b-201ENSMUST00000104838 79 ntBASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Gm12950-201ENSMUST00000121683 417 ntBASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Mir8091-201ENSMUST00000183602 139 ntBASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.71□□□□□ -0.37
Cacna1fQ9JIS7 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1fQ9JIS7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1fQ9JIS7 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1fQ9JIS7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1fQ9JIS7 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.71□□□□□ -0.38
Cacna1fQ9JIS7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1fQ9JIS7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1fQ9JIS7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1fQ9JIS7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1fQ9JIS7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1fQ9JIS7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Cacna1fQ9JIS7 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Cacna1fQ9JIS7 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms