Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Cpne8Q9DC53 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Cpne8Q9DC53 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Gm22920-201ENSMUST00000102175 109 ntBASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Gm14193-201ENSMUST00000105067 153 ntBASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Gm12218-201ENSMUST00000117666 399 ntBASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.77□□□□□ -0.53
Cpne8Q9DC53 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Gm23699-201ENSMUST00000158835 135 ntBASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Gm21778-201ENSMUST00000178779 471 ntBASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Gm8342-201ENSMUST00000209839 757 ntBASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.77□□□□□ -0.53
Cpne8Q9DC53 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.77□□□□□ -0.53
Cpne8Q9DC53 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms