Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm25076-201ENSMUST00000104098 132 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm12419-201ENSMUST00000116649 636 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm8111-201ENSMUST00000117659 987 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm12616-201ENSMUST00000118594 382 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm22334-201ENSMUST00000158070 133 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm9550-201ENSMUST00000161130 862 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm12624-201ENSMUST00000177615 382 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm12621-201ENSMUST00000177760 382 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm12615-201ENSMUST00000177970 382 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm12622-201ENSMUST00000177975 382 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm12627-201ENSMUST00000178412 382 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm12625-201ENSMUST00000179122 382 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm12614-201ENSMUST00000179586 382 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm12613-201ENSMUST00000180323 382 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm10731-201ENSMUST00000181171 448 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm44126-201ENSMUST00000204831 514 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm23105-201ENSMUST00000083719 134 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2aQ9DB34 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms