Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Gm14028-201ENSMUST00000117434 479 ntBASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Gm12857-201ENSMUST00000117678 592 ntBASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Gm12196-201ENSMUST00000120954 262 ntBASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Gm27530-201ENSMUST00000184096 98 ntBASIC11.01□□□□□ -0.65
Rnf111Q99ML9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Gm6450-201ENSMUST00000200896 574 ntBASIC11.01□□□□□ -0.65
Rnf111Q99ML9 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf111Q99ML9 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Gm11663-201ENSMUST00000117888 290 ntBASIC11□□□□□ -0.65
Rnf111Q99ML9 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Gm16481-201ENSMUST00000119074 1227 ntBASIC11□□□□□ -0.65
Rnf111Q99ML9 Gm15207-201ENSMUST00000119259 442 ntBASIC11□□□□□ -0.65
Rnf111Q99ML9 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Rnf111Q99ML9 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms