Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gng5-ps-201ENSMUST00000120931 205 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm24328-201ENSMUST00000175104 67 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Mir6973a-201ENSMUST00000183646 78 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm8502-201ENSMUST00000185708 901 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm21147-201ENSMUST00000186046 913 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm8510-201ENSMUST00000189202 895 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm2316-201ENSMUST00000190613 921 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm9369-201ENSMUST00000196009 733 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm7939-201ENSMUST00000201233 1050 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm43452-201ENSMUST00000201873 991 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 BC080696-201ENSMUST00000202858 1218 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm44044-201ENSMUST00000205178 1089 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gm35638-201ENSMUST00000220724 652 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Mir326-201ENSMUST00000083637 95 ntBASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Nkx6-1Q99MA9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-1Q99MA9 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Nkx6-1Q99MA9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-1Q99MA9 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-1Q99MA9 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-1Q99MA9 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-1Q99MA9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.71□□□□□ -0.7
Nkx6-1Q99MA9 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-1Q99MA9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-1Q99MA9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms