Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm44090-201ENSMUST00000204669 1834 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm11877-201ENSMUST00000118921 852 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm15741-201ENSMUST00000119401 754 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm14957-201ENSMUST00000121069 817 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm26083-201ENSMUST00000157904 193 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm27320-201ENSMUST00000184892 109 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm38241-201ENSMUST00000192641 898 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm9136-201ENSMUST00000193368 454 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm38117-201ENSMUST00000194653 939 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm45401-201ENSMUST00000209456 733 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 AC159297.2-201ENSMUST00000219567 1075 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm24136-201ENSMUST00000083374 165 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb3Q91XZ7 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhb3Q91XZ7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.65□□□□□ -0.55
Pcdhb3Q91XZ7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhb3Q91XZ7 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhb3Q91XZ7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhb3Q91XZ7 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.65□□□□□ -0.55
Pcdhb3Q91XZ7 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhb3Q91XZ7 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhb3Q91XZ7 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.55
Pcdhb3Q91XZ7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Pcdhb3Q91XZ7 Gm11342-203ENSMUST00000224879 1324 ntBASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm15515-201ENSMUST00000117827 822 ntBASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms