Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm34023-201ENSMUST00000195539 217 ntBASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gm9369-201ENSMUST00000196009 733 ntBASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gm42518-201ENSMUST00000196277 938 ntBASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gm9111-201ENSMUST00000219394 709 ntBASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Gm12791-201ENSMUST00000120788 655 ntBASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Gm13117-201ENSMUST00000120894 691 ntBASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Gm3828-201ENSMUST00000121817 257 ntBASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Gm24074-201ENSMUST00000158178 260 ntBASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Gm5100-201ENSMUST00000195631 589 ntBASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.18□□□□□ -0.3
Alx1Q8C8B0 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.18□□□□□ -0.3
Alx1Q8C8B0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Alx1Q8C8B0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Gm10169-201ENSMUST00000121822 348 ntBASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Snord55-201ENSMUST00000174939 79 ntBASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Gm43667-201ENSMUST00000198616 1095 ntBASIC13.17□□□□□ -0.3
Alx1Q8C8B0 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Alx1Q8C8B0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms