Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm11919-201ENSMUST00000117609 721 ntBASIC10.31□□□□□ -0.76
VcanQ62059 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC10.31□□□□□ -0.76
VcanQ62059 Gm27833-201ENSMUST00000184285 124 ntBASIC10.31□□□□□ -0.76
VcanQ62059 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.31□□□□□ -0.76
VcanQ62059 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Gm14538-201ENSMUST00000122019 1327 ntBASIC10.31□□□□□ -0.76
VcanQ62059 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.31□□□□□ -0.76
VcanQ62059 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC10.31□□□□□ -0.76
VcanQ62059 AC158519.1-201ENSMUST00000228615 179 ntBASIC10.31□□□□□ -0.76
VcanQ62059 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC10.31□□□□□ -0.76
VcanQ62059 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
VcanQ62059 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
VcanQ62059 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.31□□□□□ -0.76
VcanQ62059 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
VcanQ62059 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
VcanQ62059 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
VcanQ62059 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.31□□□□□ -0.76
VcanQ62059 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC10.31□□□□□ -0.76
VcanQ62059 Gm44716-201ENSMUST00000209007 710 ntBASIC10.31□□□□□ -0.76
VcanQ62059 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.31□□□□□ -0.76
VcanQ62059 Gm25514-201ENSMUST00000083860 135 ntBASIC10.31□□□□□ -0.76
VcanQ62059 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
VcanQ62059 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.3□□□□□ -0.76
VcanQ62059 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC10.3□□□□□ -0.76
VcanQ62059 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.3□□□□□ -0.76
VcanQ62059 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC10.3□□□□□ -0.76
VcanQ62059 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC10.3□□□□□ -0.76
VcanQ62059 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.3□□□□□ -0.76
VcanQ62059 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Snord55-201ENSMUST00000174939 79 ntBASIC10.3□□□□□ -0.76
VcanQ62059 Gm7516-201ENSMUST00000186198 706 ntBASIC10.3□□□□□ -0.76
VcanQ62059 AC165092.1-201ENSMUST00000224018 486 ntBASIC10.3□□□□□ -0.76
VcanQ62059 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
VcanQ62059 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Gm14111-201ENSMUST00000119851 999 ntBASIC10.3□□□□□ -0.76
VcanQ62059 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
VcanQ62059 Gm21963-201ENSMUST00000179519 330 ntBASIC10.3□□□□□ -0.76
VcanQ62059 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Gm8055-201ENSMUST00000099956 1008 ntBASIC10.3□□□□□ -0.76
VcanQ62059 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.3□□□□□ -0.76
VcanQ62059 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.3□□□□□ -0.76
VcanQ62059 Gm12716-201ENSMUST00000120606 1354 ntBASIC10.3□□□□□ -0.76
VcanQ62059 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC10.3□□□□□ -0.76
VcanQ62059 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VcanQ62059 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.29□□□□□ -0.76
VcanQ62059 Gm13543-201ENSMUST00000121230 796 ntBASIC10.29□□□□□ -0.76
VcanQ62059 Gm25770-201ENSMUST00000158566 115 ntBASIC10.29□□□□□ -0.76
VcanQ62059 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VcanQ62059 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC10.29□□□□□ -0.76
VcanQ62059 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC10.29□□□□□ -0.76
VcanQ62059 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.29□□□□□ -0.76
VcanQ62059 Gnpnat1-202ENSMUST00000226276 710 ntBASIC10.29□□□□□ -0.76
VcanQ62059 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms