Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Atxn1P54254 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Atxn1P54254 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
Atxn1P54254 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Atxn1P54254 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.32□□□□□ -0.6
Atxn1P54254 Gm14247-201ENSMUST00000120950 237 ntBASIC11.32□□□□□ -0.6
Atxn1P54254 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.32□□□□□ -0.6
Atxn1P54254 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Gm9625-201ENSMUST00000180422 955 ntBASIC11.32□□□□□ -0.6
Atxn1P54254 Gm8756-201ENSMUST00000183250 929 ntBASIC11.32□□□□□ -0.6
Atxn1P54254 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Gm39288-201ENSMUST00000210554 446 ntBASIC11.32□□□□□ -0.6
Atxn1P54254 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.32□□□□□ -0.6
Atxn1P54254 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.32□□□□□ -0.6
Atxn1P54254 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.32□□□□□ -0.6
Atxn1P54254 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.32□□□□□ -0.6
Atxn1P54254 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.32□□□□□ -0.6
Atxn1P54254 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Mir326-201ENSMUST00000083637 95 ntBASIC11.32□□□□□ -0.6
Atxn1P54254 Gm10263-201ENSMUST00000085163 300 ntBASIC11.32□□□□□ -0.6
Atxn1P54254 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Atxn1P54254 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Atxn1P54254 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.32□□□□□ -0.6
Atxn1P54254 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Atxn1P54254 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Atxn1P54254 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.31□□□□□ -0.6
Atxn1P54254 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Atxn1P54254 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.31□□□□□ -0.6
Atxn1P54254 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.31□□□□□ -0.6
Atxn1P54254 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Atxn1P54254 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Gm12791-201ENSMUST00000120788 655 ntBASIC11.31□□□□□ -0.6
Atxn1P54254 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Gm25830-201ENSMUST00000158923 132 ntBASIC11.31□□□□□ -0.6
Atxn1P54254 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.31□□□□□ -0.6
Atxn1P54254 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Atxn1P54254 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.31□□□□□ -0.6
Atxn1P54254 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC11.31□□□□□ -0.6
Atxn1P54254 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.31□□□□□ -0.6
Atxn1P54254 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC11.31□□□□□ -0.6
Atxn1P54254 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.31□□□□□ -0.6
Atxn1P54254 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Gm9791-201ENSMUST00000060997 447 ntBASIC11.31□□□□□ -0.6
Atxn1P54254 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Atxn1P54254 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.31□□□□□ -0.6
Atxn1P54254 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.31□□□□□ -0.6
Atxn1P54254 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Atxn1P54254 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atxn1P54254 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Atxn1P54254 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Atxn1P54254 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Atxn1P54254 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Atxn1P54254 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Atxn1P54254 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Atxn1P54254 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms