Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm7003-201ENSMUST00000195089 312 ntBASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm9353-201ENSMUST00000200472 604 ntBASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm6722-201ENSMUST00000221586 390 ntBASIC10.93□□□□□ -0.66
Tnfsf4P43488 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.93□□□□□ -0.66
Tnfsf4P43488 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.93□□□□□ -0.66
Tnfsf4P43488 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.93□□□□□ -0.66
Tnfsf4P43488 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.92□□□□□ -0.66
Tnfsf4P43488 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.92□□□□□ -0.66
Tnfsf4P43488 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm15198-201ENSMUST00000117283 177 ntBASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm14130-201ENSMUST00000118417 987 ntBASIC10.92□□□□□ -0.66
Tnfsf4P43488 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.92□□□□□ -0.66
Tnfsf4P43488 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm2965-201ENSMUST00000198365 343 ntBASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm6082-201ENSMUST00000215204 454 ntBASIC10.92□□□□□ -0.66
Tnfsf4P43488 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.92□□□□□ -0.66
Tnfsf4P43488 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf4P43488 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf4P43488 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf4P43488 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf4P43488 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms