Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Upk2P38575 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Upk2P38575 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Upk2P38575 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Upk2P38575 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Snord17-201ENSMUST00000104526 238 ntBASIC9.92□□□□□ -0.82
Upk2P38575 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Gm12419-201ENSMUST00000116649 636 ntBASIC9.92□□□□□ -0.82
Upk2P38575 Gm8111-201ENSMUST00000117659 987 ntBASIC9.92□□□□□ -0.82
Upk2P38575 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.92□□□□□ -0.82
Upk2P38575 Gm15615-201ENSMUST00000118876 198 ntBASIC9.92□□□□□ -0.82
Upk2P38575 Gm16219-201ENSMUST00000120096 274 ntBASIC9.92□□□□□ -0.82
Upk2P38575 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC9.92□□□□□ -0.82
Upk2P38575 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Gm23699-201ENSMUST00000158835 135 ntBASIC9.92□□□□□ -0.82
Upk2P38575 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Upk2P38575 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Upk2P38575 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Upk2P38575 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Upk2P38575 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Upk2P38575 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.92□□□□□ -0.82
Upk2P38575 Gm19353-201ENSMUST00000184561 445 ntBASIC9.92□□□□□ -0.82
Upk2P38575 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.92□□□□□ -0.82
Upk2P38575 Gm37284-201ENSMUST00000193607 539 ntBASIC9.92□□□□□ -0.82
Upk2P38575 Mir7686-201ENSMUST00000200604 57 ntBASIC9.92□□□□□ -0.82
Upk2P38575 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.92□□□□□ -0.82
Upk2P38575 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Upk2P38575 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Upk2P38575 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Upk2P38575 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Upk2P38575 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.92□□□□□ -0.82
Upk2P38575 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.92□□□□□ -0.82
Upk2P38575 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Upk2P38575 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Upk2P38575 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.92□□□□□ -0.82
Upk2P38575 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Upk2P38575 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Upk2P38575 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Upk2P38575 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Upk2P38575 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.91□□□□□ -0.82
Upk2P38575 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC9.91□□□□□ -0.82
Upk2P38575 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.91□□□□□ -0.82
Upk2P38575 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.91□□□□□ -0.82
Upk2P38575 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Upk2P38575 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Upk2P38575 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.91□□□□□ -0.82
Upk2P38575 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.91□□□□□ -0.82
Upk2P38575 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Upk2P38575 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Upk2P38575 BC043934-202ENSMUST00000185694 2356 ntBASIC9.91□□□□□ -0.82
Upk2P38575 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Upk2P38575 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Upk2P38575 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.91□□□□□ -0.82
Upk2P38575 Gm12218-201ENSMUST00000117666 399 ntBASIC9.91□□□□□ -0.82
Upk2P38575 Gm9062-201ENSMUST00000117712 727 ntBASIC9.91□□□□□ -0.82
Upk2P38575 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms