Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Gm22058-201ENSMUST00000083393 310 ntBASIC9.76□□□□□ -0.85
Slc6a1P31648 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Slc6a1P31648 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.76□□□□□ -0.85
Slc6a1P31648 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.76□□□□□ -0.85
Slc6a1P31648 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.75□□□□□ -0.85
Slc6a1P31648 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.75□□□□□ -0.85
Slc6a1P31648 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.75□□□□□ -0.85
Slc6a1P31648 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.75□□□□□ -0.85
Slc6a1P31648 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.75□□□□□ -0.85
Slc6a1P31648 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.75□□□□□ -0.85
Slc6a1P31648 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.75□□□□□ -0.85
Slc6a1P31648 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Gm11573-201ENSMUST00000119956 394 ntBASIC9.75□□□□□ -0.85
Slc6a1P31648 Mir1896-201ENSMUST00000122641 81 ntBASIC9.75□□□□□ -0.85
Slc6a1P31648 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.75□□□□□ -0.85
Slc6a1P31648 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Slc6a1P31648 Gm42937-201ENSMUST00000197360 752 ntBASIC9.75□□□□□ -0.85
Slc6a1P31648 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.75□□□□□ -0.85
Slc6a1P31648 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.75□□□□□ -0.85
Slc6a1P31648 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC9.75□□□□□ -0.85
Slc6a1P31648 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.75□□□□□ -0.85
Slc6a1P31648 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Slc6a1P31648 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Slc6a1P31648 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.75□□□□□ -0.85
Slc6a1P31648 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Slc6a1P31648 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Slc6a1P31648 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Slc6a1P31648 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Slc6a1P31648 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Slc6a1P31648 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Slc6a1P31648 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Slc6a1P31648 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
Slc6a1P31648 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.74□□□□□ -0.85
Slc6a1P31648 Gm11930-201ENSMUST00000117788 190 ntBASIC9.74□□□□□ -0.85
Slc6a1P31648 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.74□□□□□ -0.85
Slc6a1P31648 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Slc6a1P31648 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Gm2546-201ENSMUST00000182630 991 ntBASIC9.74□□□□□ -0.85
Slc6a1P31648 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.74□□□□□ -0.85
Slc6a1P31648 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Slc6a1P31648 Gm4959-201ENSMUST00000197271 1044 ntBASIC9.74□□□□□ -0.85
Slc6a1P31648 Gm44405-201ENSMUST00000198952 126 ntBASIC9.74□□□□□ -0.85
Slc6a1P31648 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.74□□□□□ -0.85
Slc6a1P31648 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.74□□□□□ -0.85
Slc6a1P31648 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.74□□□□□ -0.85
Slc6a1P31648 AC122371.3-201ENSMUST00000223402 1061 ntBASIC9.74□□□□□ -0.85
Slc6a1P31648 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.74□□□□□ -0.85
Slc6a1P31648 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms