Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
UbbP0CG49 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 Spata33-207ENSMUST00000212760 4074 ntBASIC9.87□□□□□ -0.83
UbbP0CG49 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
UbbP0CG49 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
UbbP0CG49 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
UbbP0CG49 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.87□□□□□ -0.83
UbbP0CG49 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UbbP0CG49 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.86□□□□□ -0.83
UbbP0CG49 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
UbbP0CG49 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.86□□□□□ -0.83
UbbP0CG49 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
UbbP0CG49 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.86□□□□□ -0.83
UbbP0CG49 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.86□□□□□ -0.83
UbbP0CG49 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC9.86□□□□□ -0.83
UbbP0CG49 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
UbbP0CG49 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Gm43433-201ENSMUST00000196573 481 ntBASIC9.86□□□□□ -0.83
UbbP0CG49 Gm43184-201ENSMUST00000197247 542 ntBASIC9.86□□□□□ -0.83
UbbP0CG49 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
UbbP0CG49 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.86□□□□□ -0.83
UbbP0CG49 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Gm9823-201ENSMUST00000051212 327 ntBASIC9.86□□□□□ -0.83
UbbP0CG49 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
UbbP0CG49 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.86□□□□□ -0.83
UbbP0CG49 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.86□□□□□ -0.83
UbbP0CG49 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.86□□□□□ -0.83
UbbP0CG49 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UbbP0CG49 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
UbbP0CG49 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
UbbP0CG49 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
UbbP0CG49 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.85□□□□□ -0.83
UbbP0CG49 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
UbbP0CG49 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
UbbP0CG49 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
UbbP0CG49 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UbbP0CG49 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
UbbP0CG49 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
UbbP0CG49 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
UbbP0CG49 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
UbbP0CG49 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
UbbP0CG49 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
UbbP0CG49 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UbbP0CG49 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UbbP0CG49 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.85□□□□□ -0.83
UbbP0CG49 Gm13296-201ENSMUST00000117854 997 ntBASIC9.85□□□□□ -0.83
UbbP0CG49 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.85□□□□□ -0.83
UbbP0CG49 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UbbP0CG49 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
UbbP0CG49 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
UbbP0CG49 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.85□□□□□ -0.83
UbbP0CG49 Gm4310-201ENSMUST00000177847 889 ntBASIC9.85□□□□□ -0.83
UbbP0CG49 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.85□□□□□ -0.83
UbbP0CG49 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UbbP0CG49 Gm17827-201ENSMUST00000211825 742 ntBASIC9.85□□□□□ -0.83
UbbP0CG49 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.85□□□□□ -0.83
UbbP0CG49 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.85□□□□□ -0.83
UbbP0CG49 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.85□□□□□ -0.83
UbbP0CG49 Gm9368-201ENSMUST00000219348 831 ntBASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms