Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC7.14□□□□□ -1.27
P06320 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
P06320 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
P06320 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
P06320 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
P06320 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
P06320 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
P06320 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
P06320 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
P06320 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
P06320 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
P06320 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
P06320 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
P06320 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
P06320 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
P06320 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC7.13□□□□□ -1.27
P06320 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
P06320 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
P06320 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Gm43127-201ENSMUST00000195890 2789 ntBASIC7.13□□□□□ -1.27
P06320 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Gm5620-201ENSMUST00000077991 1348 ntBASIC7.13□□□□□ -1.27
P06320 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC7.13□□□□□ -1.27
P06320 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC7.13□□□□□ -1.27
P06320 Gm12164-201ENSMUST00000121695 551 ntBASIC7.13□□□□□ -1.27
P06320 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC7.13□□□□□ -1.27
P06320 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC7.13□□□□□ -1.27
P06320 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC7.13□□□□□ -1.27
P06320 Gm7809-201ENSMUST00000153199 742 ntBASIC7.13□□□□□ -1.27
P06320 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
P06320 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Gm3890-201ENSMUST00000182416 207 ntBASIC7.13□□□□□ -1.27
P06320 Gm27682-201ENSMUST00000183930 110 ntBASIC7.13□□□□□ -1.27
P06320 Gm29649-201ENSMUST00000185649 419 ntBASIC7.13□□□□□ -1.27
P06320 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC7.13□□□□□ -1.27
P06320 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC7.13□□□□□ -1.27
P06320 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
P06320 n-R5s195-201ENSMUST00000082891 119 ntBASIC7.13□□□□□ -1.27
P06320 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC7.13□□□□□ -1.27
P06320 AC153380.1-201ENSMUST00000214959 2364 ntBASIC7.13□□□□□ -1.27
P06320 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
P06320 Gm37447-201ENSMUST00000195625 2928 ntBASIC7.13□□□□□ -1.27
P06320 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
P06320 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Myo1c-202ENSMUST00000102504 4659 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
P06320 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
P06320 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC7.13□□□□□ -1.27
P06320 Zbtb34-202ENSMUST00000113158 6602 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
P06320 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
P06320 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
P06320 AC154352.1-201ENSMUST00000221477 2365 ntBASIC7.12□□□□□ -1.27
P06320 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
P06320 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
P06320 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
P06320 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC7.12□□□□□ -1.27
P06320 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
P06320 Gm19680-201ENSMUST00000095050 1513 ntBASIC7.12□□□□□ -1.27
P06320 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
P06320 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
P06320 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
P06320 Gm8706-201ENSMUST00000197372 1491 ntBASIC7.12□□□□□ -1.27
P06320 Zscan30-202ENSMUST00000224144 1458 ntBASIC7.12□□□□□ -1.27
P06320 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
P06320 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC7.12□□□□□ -1.27
P06320 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
P06320 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
P06320 Gm42971-201ENSMUST00000199228 2079 ntBASIC7.12□□□□□ -1.27
P06320 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
P06320 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
P06320 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms