Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC8.26□□□□□ -1.09
TcraP01849 Gm8494-201ENSMUST00000178171 1233 ntBASIC8.26□□□□□ -1.09
TcraP01849 Gm6114-201ENSMUST00000182472 968 ntBASIC8.26□□□□□ -1.09
TcraP01849 Gm8565-201ENSMUST00000183259 1014 ntBASIC8.26□□□□□ -1.09
TcraP01849 Gm5745-201ENSMUST00000183748 313 ntBASIC8.26□□□□□ -1.09
TcraP01849 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
TcraP01849 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC8.26□□□□□ -1.09
TcraP01849 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC8.26□□□□□ -1.09
TcraP01849 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC8.26□□□□□ -1.09
TcraP01849 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC8.26□□□□□ -1.09
TcraP01849 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 AC126253.1-201ENSMUST00000227974 824 ntBASIC8.26□□□□□ -1.09
TcraP01849 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC8.26□□□□□ -1.09
TcraP01849 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
TcraP01849 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Gm10417-201ENSMUST00000194341 3522 ntBASIC8.26□□□□□ -1.09
TcraP01849 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
TcraP01849 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
TcraP01849 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Gm43127-201ENSMUST00000195890 2789 ntBASIC8.26□□□□□ -1.09
TcraP01849 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
TcraP01849 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Lrtm1-203ENSMUST00000224760 3060 ntBASIC8.26□□□□□ -1.09
TcraP01849 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TcraP01849 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
TcraP01849 Phtf1os-201ENSMUST00000160110 4046 ntBASIC8.26□□□□□ -1.09
TcraP01849 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
TcraP01849 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 AC122273.1-201ENSMUST00000213634 2327 ntBASIC8.25□□□□□ -1.09
TcraP01849 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
TcraP01849 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
TcraP01849 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
TcraP01849 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC8.25□□□□□ -1.09
TcraP01849 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
TcraP01849 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC8.25□□□□□ -1.09
TcraP01849 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC8.25□□□□□ -1.09
TcraP01849 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC8.25□□□□□ -1.09
TcraP01849 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC8.25□□□□□ -1.09
TcraP01849 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Gm20796-201ENSMUST00000180355 5838 ntBASIC8.25□□□□□ -1.09
TcraP01849 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
TcraP01849 Gm18798-201ENSMUST00000187264 1700 ntBASIC8.25□□□□□ -1.09
TcraP01849 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC8.25□□□□□ -1.09
TcraP01849 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
TcraP01849 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms