Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 AC154585.1-201ENSMUST00000218917 997 ntBASIC14.45□□□□□ -0.1
Ubr1O70481 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC14.45□□□□□ -0.1
Ubr1O70481 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 AC149588.2-201ENSMUST00000228182 1859 ntBASIC14.44□□□□□ -0.1
Ubr1O70481 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ubr1O70481 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ubr1O70481 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.44□□□□□ -0.1
Ubr1O70481 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Ubr1O70481 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC14.44□□□□□ -0.1
Ubr1O70481 Gm16441-201ENSMUST00000138176 924 ntBASIC14.44□□□□□ -0.1
Ubr1O70481 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC14.44□□□□□ -0.1
Ubr1O70481 Gm6038-201ENSMUST00000154310 948 ntBASIC14.44□□□□□ -0.1
Ubr1O70481 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC14.44□□□□□ -0.1
Ubr1O70481 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC14.44□□□□□ -0.1
Ubr1O70481 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ubr1O70481 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC14.44□□□□□ -0.1
Ubr1O70481 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
Ubr1O70481 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ubr1O70481 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.44□□□□□ -0.1
Ubr1O70481 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr1O70481 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Gm12716-201ENSMUST00000120606 1354 ntBASIC14.43□□□□□ -0.1
Ubr1O70481 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ubr1O70481 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC14.43□□□□□ -0.1
Ubr1O70481 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ubr1O70481 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ubr1O70481 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC14.43□□□□□ -0.1
Ubr1O70481 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC14.43□□□□□ -0.1
Ubr1O70481 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ubr1O70481 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC14.43□□□□□ -0.1
Ubr1O70481 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC14.43□□□□□ -0.1
Ubr1O70481 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Gm43547-201ENSMUST00000197729 328 ntBASIC14.43□□□□□ -0.1
Ubr1O70481 Gm44420-201ENSMUST00000203669 490 ntBASIC14.43□□□□□ -0.1
Ubr1O70481 Gm8557-201ENSMUST00000220777 475 ntBASIC14.43□□□□□ -0.1
Ubr1O70481 AC164099.1-201ENSMUST00000227780 333 ntBASIC14.43□□□□□ -0.1
Ubr1O70481 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.43□□□□□ -0.1
Ubr1O70481 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC14.43□□□□□ -0.1
Ubr1O70481 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ubr1O70481 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubr1O70481 Gm35850-202ENSMUST00000211705 2120 ntBASIC14.43□□□□□ -0.1
Ubr1O70481 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Ubr1O70481 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr1O70481 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr1O70481 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC14.42□□□□□ -0.1
Ubr1O70481 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.42□□□□□ -0.1
Ubr1O70481 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC14.42□□□□□ -0.1
Ubr1O70481 Gm37688-201ENSMUST00000195195 465 ntBASIC14.42□□□□□ -0.1
Ubr1O70481 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.42□□□□□ -0.1
Ubr1O70481 Gm5302-201ENSMUST00000202130 796 ntBASIC14.42□□□□□ -0.1
Ubr1O70481 Gm9619-201ENSMUST00000211587 762 ntBASIC14.42□□□□□ -0.1
Ubr1O70481 AC101205.2-201ENSMUST00000226206 715 ntBASIC14.42□□□□□ -0.1
Ubr1O70481 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr1O70481 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ubr1O70481 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr1O70481 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr1O70481 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC14.42□□□□□ -0.1
Ubr1O70481 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr1O70481 Gm37264-201ENSMUST00000194916 2192 ntBASIC14.42□□□□□ -0.1
Ubr1O70481 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.42□□□□□ -0.1
Ubr1O70481 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr1O70481 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr1O70481 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ubr1O70481 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms