Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.05□□□□□ -0.64
Cdh17Q9R100 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.05□□□□□ -0.64
Cdh17Q9R100 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.05□□□□□ -0.64
Cdh17Q9R100 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.04□□□□□ -0.64
Cdh17Q9R100 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.04□□□□□ -0.64
Cdh17Q9R100 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Gm25148-201ENSMUST00000104611 123 ntBASIC11.04□□□□□ -0.64
Cdh17Q9R100 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Gm9540-201ENSMUST00000188230 478 ntBASIC11.04□□□□□ -0.64
Cdh17Q9R100 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Gm5996-201ENSMUST00000211110 718 ntBASIC11.04□□□□□ -0.64
Cdh17Q9R100 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh17Q9R100 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.04□□□□□ -0.64
Cdh17Q9R100 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdh17Q9R100 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh17Q9R100 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.03□□□□□ -0.64
Cdh17Q9R100 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Snord17-201ENSMUST00000104526 238 ntBASIC11.03□□□□□ -0.64
Cdh17Q9R100 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.03□□□□□ -0.64
Cdh17Q9R100 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.03□□□□□ -0.64
Cdh17Q9R100 Gm12407-201ENSMUST00000180219 324 ntBASIC11.03□□□□□ -0.64
Cdh17Q9R100 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh17Q9R100 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms