Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Gm11380-201ENSMUST00000118067 560 ntBASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cacna1fQ9JIS7 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Gm11993-201ENSMUST00000121861 820 ntBASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Gm44420-201ENSMUST00000203669 490 ntBASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Gm8684-201ENSMUST00000195078 1564 ntBASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Mir1249-201ENSMUST00000116791 98 ntBASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Gm6238-201ENSMUST00000120999 465 ntBASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Gm24346-201ENSMUST00000158712 194 ntBASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cacna1fQ9JIS7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Gm25288-201ENSMUST00000122800 265 ntBASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Gm24078-201ENSMUST00000158184 103 ntBASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1fQ9JIS7 Gm42432-201ENSMUST00000197902 1617 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms