Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Olfr584-201ENSMUST00000098210 964 ntBASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.83□□□□□ -0.51
Chmp2aQ9DB34 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Chmp2aQ9DB34 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Gm16166-201ENSMUST00000118291 787 ntBASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Gm23045-201ENSMUST00000175041 96 ntBASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2aQ9DB34 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm14263-201ENSMUST00000117955 746 ntBASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm11244-201ENSMUST00000121243 237 ntBASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm15881-201ENSMUST00000148792 942 ntBASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm3329-201ENSMUST00000159873 556 ntBASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm6485-201ENSMUST00000160676 439 ntBASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm37986-201ENSMUST00000193285 383 ntBASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm44315-201ENSMUST00000203041 219 ntBASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm45770-201ENSMUST00000212105 616 ntBASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.82□□□□□ -0.52
Chmp2aQ9DB34 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms