Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Gm22323-201ENSMUST00000103832 109 ntBASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Gm27627-201ENSMUST00000183644 150 ntBASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Gm28686-201ENSMUST00000187404 609 ntBASIC11.68□□□□□ -0.54
Snf8Q9CZ28 AA914427-201ENSMUST00000193194 1166 ntBASIC11.68□□□□□ -0.54
Snf8Q9CZ28 AY036118-201ENSMUST00000200021 923 ntBASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Gm26448-201ENSMUST00000082446 203 ntBASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snf8Q9CZ28 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Gm25700-201ENSMUST00000177693 110 ntBASIC11.67□□□□□ -0.54
Snf8Q9CZ28 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Gm37259-201ENSMUST00000193903 849 ntBASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Gm9353-201ENSMUST00000200472 604 ntBASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Gm17812-201ENSMUST00000204935 318 ntBASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snf8Q9CZ28 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snf8Q9CZ28 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms