Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cdk5rap3Q99LM2 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdk5rap3Q99LM2 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdk5rap3Q99LM2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.77□□□□□ -0.52
Cdk5rap3Q99LM2 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Cdk5rap3Q99LM2 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Gm15198-201ENSMUST00000117283 177 ntBASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Gm45575-201ENSMUST00000210283 548 ntBASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk5rap3Q99LM2 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Gm14724-201ENSMUST00000118400 537 ntBASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Gm14130-201ENSMUST00000118417 987 ntBASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Gm16505-201ENSMUST00000179981 232 ntBASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Gm7003-201ENSMUST00000195089 312 ntBASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Gm43179-201ENSMUST00000198797 275 ntBASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Gm6082-201ENSMUST00000215204 454 ntBASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk5rap3Q99LM2 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms