Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gm8459-201ENSMUST00000162504 760 ntBASIC10.99□□□□□ -0.65
Cstf3Q99LI7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gm4482-201ENSMUST00000200876 742 ntBASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gm45186-201ENSMUST00000206874 478 ntBASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.99□□□□□ -0.65
Cstf3Q99LI7 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Gm14208-201ENSMUST00000119645 678 ntBASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Gm12266-201ENSMUST00000120311 962 ntBASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Gm14017-201ENSMUST00000121934 386 ntBASIC10.98□□□□□ -0.65
Cstf3Q99LI7 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Gm17040-202ENSMUST00000170597 889 ntBASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cstf3Q99LI7 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms