Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
StrcQ8VIM6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Gm2716-201ENSMUST00000212350 643 ntBASIC13.17□□□□□ -0.3
StrcQ8VIM6 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Gm25483-201ENSMUST00000083224 227 ntBASIC13.17□□□□□ -0.3
StrcQ8VIM6 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm23062-201ENSMUST00000102349 110 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Snora68-201ENSMUST00000104375 131 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm8482-201ENSMUST00000117972 471 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm13841-201ENSMUST00000118829 483 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm11449-201ENSMUST00000119175 476 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm15793-201ENSMUST00000121857 495 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm8210-201ENSMUST00000178557 483 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm15454-201ENSMUST00000179718 483 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm2328-201ENSMUST00000193525 535 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.16□□□□□ -0.3
StrcQ8VIM6 AC114585.2-201ENSMUST00000227693 486 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm6344-201ENSMUST00000075962 483 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm14153-201ENSMUST00000119923 1139 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm14370-201ENSMUST00000122460 868 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm15273-201ENSMUST00000142302 868 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm7023-201ENSMUST00000147295 868 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm14357-201ENSMUST00000178352 868 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm14361-201ENSMUST00000178547 868 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm14348-201ENSMUST00000179183 868 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Mir6396-201ENSMUST00000183603 111 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm38038-201ENSMUST00000193803 259 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Gm19090-201ENSMUST00000218187 774 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 AC155300.1-201ENSMUST00000219134 480 ntBASIC13.16□□□□□ -0.3
StrcQ8VIM6 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
StrcQ8VIM6 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Gm3283-201ENSMUST00000199319 1350 ntBASIC13.15□□□□□ -0.3
StrcQ8VIM6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Gm12254-201ENSMUST00000134617 471 ntBASIC13.15□□□□□ -0.3
StrcQ8VIM6 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Gm5873-201ENSMUST00000177157 1066 ntBASIC13.15□□□□□ -0.3
StrcQ8VIM6 Gm17799-201ENSMUST00000183270 667 ntBASIC13.15□□□□□ -0.3
StrcQ8VIM6 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.15□□□□□ -0.3
StrcQ8VIM6 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
StrcQ8VIM6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms