Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm14130-201ENSMUST00000118417 987 ntBASIC11.74□□□□□ -0.53
Trim60Q8VI40 Gm13350-201ENSMUST00000120519 479 ntBASIC11.74□□□□□ -0.53
Trim60Q8VI40 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.74□□□□□ -0.53
Trim60Q8VI40 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.74□□□□□ -0.53
Trim60Q8VI40 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Gm16505-201ENSMUST00000179981 232 ntBASIC11.74□□□□□ -0.53
Trim60Q8VI40 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.74□□□□□ -0.53
Trim60Q8VI40 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Gm37666-201ENSMUST00000194110 866 ntBASIC11.74□□□□□ -0.53
Trim60Q8VI40 Gm42867-201ENSMUST00000202995 469 ntBASIC11.74□□□□□ -0.53
Trim60Q8VI40 Gm7783-201ENSMUST00000204795 781 ntBASIC11.74□□□□□ -0.53
Trim60Q8VI40 Gm45575-201ENSMUST00000210283 548 ntBASIC11.74□□□□□ -0.53
Trim60Q8VI40 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Trim60Q8VI40 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.74□□□□□ -0.53
Trim60Q8VI40 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim60Q8VI40 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.74□□□□□ -0.53
Trim60Q8VI40 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Gm15711-201ENSMUST00000118889 535 ntBASIC11.73□□□□□ -0.53
Trim60Q8VI40 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.73□□□□□ -0.53
Trim60Q8VI40 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.73□□□□□ -0.53
Trim60Q8VI40 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.73□□□□□ -0.53
Trim60Q8VI40 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Gm45856-201ENSMUST00000212752 416 ntBASIC11.73□□□□□ -0.53
Trim60Q8VI40 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.73□□□□□ -0.53
Trim60Q8VI40 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim60Q8VI40 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.72□□□□□ -0.53
Trim60Q8VI40 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm12380-201ENSMUST00000119012 544 ntBASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm11573-201ENSMUST00000119956 394 ntBASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm12196-201ENSMUST00000120954 262 ntBASIC11.72□□□□□ -0.53
Trim60Q8VI40 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm24749-201ENSMUST00000157838 343 ntBASIC11.72□□□□□ -0.53
Trim60Q8VI40 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm37259-201ENSMUST00000193903 849 ntBASIC11.72□□□□□ -0.53
Trim60Q8VI40 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm9353-201ENSMUST00000200472 604 ntBASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm6867-201ENSMUST00000219165 425 ntBASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm6722-201ENSMUST00000221586 390 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms