Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm7467-201ENSMUST00000185173 652 ntBASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Gm43163-201ENSMUST00000196571 442 ntBASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Gm44323-201ENSMUST00000198689 129 ntBASIC13.25□□□□□ -0.29
Usp44Q8C2S0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Gm45770-201ENSMUST00000212105 616 ntBASIC13.25□□□□□ -0.29
Usp44Q8C2S0 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.25□□□□□ -0.29
Usp44Q8C2S0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Gm11246-201ENSMUST00000120880 345 ntBASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Mir1943-201ENSMUST00000158276 73 ntBASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Gm9550-201ENSMUST00000161130 862 ntBASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Gm9463-201ENSMUST00000206707 601 ntBASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.24□□□□□ -0.29
Usp44Q8C2S0 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Gm10263-201ENSMUST00000085163 300 ntBASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp44Q8C2S0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Gm14592-201ENSMUST00000117201 560 ntBASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Uba52-ps-201ENSMUST00000183770 379 ntBASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Gm5599-201ENSMUST00000209602 788 ntBASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms