Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Gm12950-201ENSMUST00000121683 417 ntBASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 AC137871.1-201ENSMUST00000228278 475 ntBASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 AC153524.2-202ENSMUST00000220401 1794 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Gm12461-201ENSMUST00000120231 1239 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Gm24346-201ENSMUST00000158712 194 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Gm27440-201ENSMUST00000184785 107 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Gm6794-201ENSMUST00000203829 457 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 CT030195.2-201ENSMUST00000226074 1286 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Gm6564-201ENSMUST00000075377 619 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Gm37197-201ENSMUST00000195607 401 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Gm43610-201ENSMUST00000199117 365 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Gm7238-201ENSMUST00000206467 973 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 CT009713.2-201ENSMUST00000225532 1149 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 AC158986.2-201ENSMUST00000227487 618 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Mir326-201ENSMUST00000083637 95 ntBASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Nup98Q6PFD9 Gm8684-201ENSMUST00000195078 1564 ntBASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Gm13204-201ENSMUST00000120110 821 ntBASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC13.15□□□□□ -0.3
Nup98Q6PFD9 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms