Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm15881-201ENSMUST00000148792 942 ntBASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm19459-201ENSMUST00000176240 835 ntBASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm43916-201ENSMUST00000205062 967 ntBASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm17831-201ENSMUST00000205579 900 ntBASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm9132-201ENSMUST00000210182 832 ntBASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm45770-201ENSMUST00000212105 616 ntBASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Gm29358-202ENSMUST00000187941 3227 ntBASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcc2Q6PDG5 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Gm29245-201ENSMUST00000187332 1416 ntBASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Gm15131-201ENSMUST00000119124 595 ntBASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Gm24844-201ENSMUST00000158679 127 ntBASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Gm44506-201ENSMUST00000206278 965 ntBASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Gm6722-201ENSMUST00000221586 390 ntBASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc2Q6PDG5 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 AC125374.1-201ENSMUST00000213573 1400 ntBASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms