Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC10.9□□□□□ -0.67
Col12a1Q60847 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Col12a1Q60847 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col12a1Q60847 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Col12a1Q60847 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col12a1Q60847 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm17797-201ENSMUST00000182175 997 ntBASIC10.89□□□□□ -0.67
Col12a1Q60847 Mir8111-201ENSMUST00000184463 137 ntBASIC10.89□□□□□ -0.67
Col12a1Q60847 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.89□□□□□ -0.67
Col12a1Q60847 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Col12a1Q60847 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.89□□□□□ -0.67
Col12a1Q60847 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.89□□□□□ -0.67
Col12a1Q60847 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Col12a1Q60847 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 AC165092.1-201ENSMUST00000224018 486 ntBASIC10.89□□□□□ -0.67
Col12a1Q60847 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm8174-201ENSMUST00000064353 1001 ntBASIC10.89□□□□□ -0.67
Col12a1Q60847 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm38301-201ENSMUST00000195573 543 ntBASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col12a1Q60847 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Gm15727-201ENSMUST00000122416 437 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 Gm13857-201ENSMUST00000139645 173 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 Gm5259-201ENSMUST00000191231 800 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC10.88□□□□□ -0.67
Col12a1Q60847 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC10.88□□□□□ -0.67
Col12a1Q60847 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Gm14538-201ENSMUST00000122019 1327 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col12a1Q60847 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col12a1Q60847 Snord17-201ENSMUST00000104526 238 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 AC134607.1-201ENSMUST00000214707 485 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Gm18030-201ENSMUST00000222163 731 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 AC161374.2-201ENSMUST00000223662 596 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Col12a1Q60847 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.88□□□□□ -0.67
Col12a1Q60847 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col12a1Q60847 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms