Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm27375-201ENSMUST00000183799 107 ntBASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gm5896-201ENSMUST00000189662 1024 ntBASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gm6745-201ENSMUST00000199216 526 ntBASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gm9908-201ENSMUST00000211534 448 ntBASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gm29705-201ENSMUST00000212598 474 ntBASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Rac2-201ENSMUST00000043214 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Snord83b-201ENSMUST00000104546 94 ntBASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Gm12960-201ENSMUST00000120017 1066 ntBASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Gm29649-201ENSMUST00000185649 419 ntBASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Gm5904-201ENSMUST00000210286 865 ntBASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 AC069562.3-201ENSMUST00000225387 587 ntBASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Acad10-202ENSMUST00000111770 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC8.5□□□□□ -1.05
Trav3-3Q5R1C3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gm10748-202ENSMUST00000194396 2379 ntBASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 AC158779.1-201ENSMUST00000228912 3861 ntBASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 119.3 ms