Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Fam196aQ3USH1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fam196aQ3USH1 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Fam196aQ3USH1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fam196aQ3USH1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Fam196aQ3USH1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Fam196aQ3USH1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fam196aQ3USH1 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fam196aQ3USH1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fam196aQ3USH1 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Gm9133-201ENSMUST00000118289 540 ntBASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Gm15374-201ENSMUST00000119313 844 ntBASIC11.48□□□□□ -0.57
Fam196aQ3USH1 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Kif4-ps-202ENSMUST00000185083 652 ntBASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Gm18552-201ENSMUST00000187425 538 ntBASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Gm29543-201ENSMUST00000188138 967 ntBASIC11.48□□□□□ -0.57
Fam196aQ3USH1 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Gm29067-201ENSMUST00000190821 470 ntBASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Gm2474-201ENSMUST00000195162 559 ntBASIC11.48□□□□□ -0.57
Fam196aQ3USH1 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.48□□□□□ -0.57
Fam196aQ3USH1 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Fam196aQ3USH1 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Gm7805-201ENSMUST00000154348 448 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Gm23582-201ENSMUST00000158530 139 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Gm20694-201ENSMUST00000176943 404 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Gm27444-201ENSMUST00000184157 137 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms