Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tff1Q08423 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tff1Q08423 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Tff1Q08423 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tff1Q08423 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tff1Q08423 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.45□□□□□ -0.9
Tff1Q08423 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Tff1Q08423 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Tff1Q08423 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tff1Q08423 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Tff1Q08423 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tff1Q08423 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.44□□□□□ -0.9
Tff1Q08423 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Tff1Q08423 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Tff1Q08423 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Tff1Q08423 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Tff1Q08423 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC9.44□□□□□ -0.9
Tff1Q08423 Gm16397-201ENSMUST00000122201 494 ntBASIC9.44□□□□□ -0.9
Tff1Q08423 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.44□□□□□ -0.9
Tff1Q08423 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Gm8194-201ENSMUST00000159783 859 ntBASIC9.44□□□□□ -0.9
Tff1Q08423 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.44□□□□□ -0.9
Tff1Q08423 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.44□□□□□ -0.9
Tff1Q08423 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.44□□□□□ -0.9
Tff1Q08423 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC9.44□□□□□ -0.9
Tff1Q08423 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.44□□□□□ -0.9
Tff1Q08423 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Tff1Q08423 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Tff1Q08423 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Tff1Q08423 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.44□□□□□ -0.9
Tff1Q08423 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.44□□□□□ -0.9
Tff1Q08423 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.44□□□□□ -0.9
Tff1Q08423 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tff1Q08423 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Tff1Q08423 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.43□□□□□ -0.9
Tff1Q08423 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Tff1Q08423 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Tff1Q08423 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.43□□□□□ -0.9
Tff1Q08423 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.43□□□□□ -0.9
Tff1Q08423 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Tff1Q08423 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.43□□□□□ -0.9
Tff1Q08423 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Tff1Q08423 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.43□□□□□ -0.9
Tff1Q08423 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Tff1Q08423 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC9.43□□□□□ -0.9
Tff1Q08423 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Tff1Q08423 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Tff1Q08423 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Tff1Q08423 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Tff1Q08423 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.43□□□□□ -0.9
Tff1Q08423 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Gm28071-201ENSMUST00000190355 478 ntBASIC9.43□□□□□ -0.9
Tff1Q08423 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Gm44551-201ENSMUST00000208804 171 ntBASIC9.43□□□□□ -0.9
Tff1Q08423 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.43□□□□□ -0.9
Tff1Q08423 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.43□□□□□ -0.9
Tff1Q08423 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms