Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.54□□□□□ -0.56
ThraP63058 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
ThraP63058 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.54□□□□□ -0.56
ThraP63058 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.54□□□□□ -0.56
ThraP63058 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.54□□□□□ -0.56
ThraP63058 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
ThraP63058 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
ThraP63058 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
ThraP63058 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ThraP63058 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ThraP63058 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
ThraP63058 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ThraP63058 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ThraP63058 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ThraP63058 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ThraP63058 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ThraP63058 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.54□□□□□ -0.56
ThraP63058 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
ThraP63058 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.54□□□□□ -0.56
ThraP63058 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ThraP63058 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.54□□□□□ -0.56
ThraP63058 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
ThraP63058 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
ThraP63058 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.54□□□□□ -0.56
ThraP63058 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ThraP63058 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
ThraP63058 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.53□□□□□ -0.56
ThraP63058 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
ThraP63058 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.53□□□□□ -0.56
ThraP63058 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
ThraP63058 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
ThraP63058 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
ThraP63058 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.53□□□□□ -0.56
ThraP63058 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
ThraP63058 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Gm15004-201ENSMUST00000119192 630 ntBASIC11.53□□□□□ -0.56
ThraP63058 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.53□□□□□ -0.56
ThraP63058 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Gm4726-201ENSMUST00000135604 736 ntBASIC11.53□□□□□ -0.56
ThraP63058 Gm7666-201ENSMUST00000146631 819 ntBASIC11.53□□□□□ -0.56
ThraP63058 Gm6019-201ENSMUST00000148369 736 ntBASIC11.53□□□□□ -0.56
ThraP63058 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
ThraP63058 Gm8815-201ENSMUST00000173809 620 ntBASIC11.53□□□□□ -0.56
ThraP63058 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
ThraP63058 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
ThraP63058 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.53□□□□□ -0.56
ThraP63058 Gm9540-201ENSMUST00000188230 478 ntBASIC11.53□□□□□ -0.56
ThraP63058 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.53□□□□□ -0.56
ThraP63058 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.53□□□□□ -0.56
ThraP63058 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.53□□□□□ -0.56
ThraP63058 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
ThraP63058 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
ThraP63058 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.53□□□□□ -0.56
ThraP63058 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
ThraP63058 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
ThraP63058 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
ThraP63058 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
ThraP63058 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.53□□□□□ -0.56
ThraP63058 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.53□□□□□ -0.56
ThraP63058 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
ThraP63058 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ThraP63058 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
ThraP63058 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ThraP63058 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ThraP63058 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
ThraP63058 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.52□□□□□ -0.56
ThraP63058 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
ThraP63058 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
ThraP63058 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ThraP63058 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
ThraP63058 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
ThraP63058 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
ThraP63058 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms