Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm43778-201ENSMUST00000199438 199 ntBASIC12.12□□□□□ -0.47
NrlP54846 Gm6423-201ENSMUST00000204315 934 ntBASIC12.12□□□□□ -0.47
NrlP54846 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NrlP54846 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.12□□□□□ -0.47
NrlP54846 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.12□□□□□ -0.47
NrlP54846 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.12□□□□□ -0.47
NrlP54846 Gm7536-201ENSMUST00000077389 444 ntBASIC12.12□□□□□ -0.47
NrlP54846 Gm5453-201ENSMUST00000080866 447 ntBASIC12.12□□□□□ -0.47
NrlP54846 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NrlP54846 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NrlP54846 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NrlP54846 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NrlP54846 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NrlP54846 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NrlP54846 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NrlP54846 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.12□□□□□ -0.47
NrlP54846 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NrlP54846 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NrlP54846 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.11□□□□□ -0.47
NrlP54846 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NrlP54846 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.11□□□□□ -0.47
NrlP54846 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NrlP54846 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.11□□□□□ -0.47
NrlP54846 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.11□□□□□ -0.47
NrlP54846 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.11□□□□□ -0.47
NrlP54846 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.11□□□□□ -0.47
NrlP54846 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.11□□□□□ -0.47
NrlP54846 Gm7902-201ENSMUST00000198842 947 ntBASIC12.11□□□□□ -0.47
NrlP54846 Gm43671-201ENSMUST00000200422 433 ntBASIC12.11□□□□□ -0.47
NrlP54846 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.11□□□□□ -0.47
NrlP54846 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.11□□□□□ -0.47
NrlP54846 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NrlP54846 Gm44647-201ENSMUST00000207402 428 ntBASIC12.11□□□□□ -0.47
NrlP54846 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NrlP54846 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NrlP54846 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
NrlP54846 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.11□□□□□ -0.47
NrlP54846 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NrlP54846 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.11□□□□□ -0.47
NrlP54846 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.11□□□□□ -0.47
NrlP54846 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NrlP54846 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NrlP54846 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.1□□□□□ -0.47
NrlP54846 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NrlP54846 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.1□□□□□ -0.47
NrlP54846 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.1□□□□□ -0.47
NrlP54846 Gm11960-201ENSMUST00000122068 925 ntBASIC12.1□□□□□ -0.47
NrlP54846 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.1□□□□□ -0.47
NrlP54846 Gm20495-201ENSMUST00000173902 235 ntBASIC12.1□□□□□ -0.47
NrlP54846 Gm9081-201ENSMUST00000182346 991 ntBASIC12.1□□□□□ -0.47
NrlP54846 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.1□□□□□ -0.47
NrlP54846 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.1□□□□□ -0.47
NrlP54846 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.1□□□□□ -0.47
NrlP54846 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NrlP54846 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.1□□□□□ -0.47
NrlP54846 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.09□□□□□ -0.47
NrlP54846 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms